{
  "_id": "6a1029b7acfb0bcc41c9198e",
  "Package": "clusternomics",
  "Type": "Package",
  "Title": "Integrative Clustering for Heterogeneous Biomedical Datasets",
  "Version": "0.1.1",
  "Author": "Evelina Gabasova",
  "Maintainer": "Evelina Gabasova <egabasova@gmail.com>",
  "Description": "Integrative context-dependent clustering for heterogeneous\nbiomedical datasets. Identifies local clustering structures in\nrelated datasets, and a global clusters that exist across the\ndatasets.",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/evelinag/clusternomics",
  "BugReports": "https://github.com/evelinag/clusternomics/issues",
  "RoxygenNote": "5.0.1",
  "VignetteBuilder": "knitr",
  "Repository": "https://evelinag.r-universe.dev",
  "Date/Publication": "2017-03-14 13:56:55 UTC",
  "RemoteUrl": "https://github.com/evelinag/clusternomics",
  "RemoteRef": "HEAD",
  "RemoteSha": "ebccead47a895d513a8e4641acb49f7638f17151",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-22 09:56:58 UTC",
    "User": "root"
  },
  "MD5sum": "0aa381ab29a6a1bd608b03cb1de2b804",
  "_user": "evelinag",
  "_type": "src",
  "_file": "clusternomics_0.1.1.tar.gz",
  "_fileid": "88c06d89a5416c0ed5b0f780b5102f004e90f646f7b877d0b35fc63b0ee7088c",
  "_filesize": 562591,
  "_sha256": "88c06d89a5416c0ed5b0f780b5102f004e90f646f7b877d0b35fc63b0ee7088c",
  "_created": "2026-05-22T09:56:58.000Z",
  "_published": "2026-05-22T10:02:31.986Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77357427137,
      "time": 287,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7157879982"
    },
    {
      "job": 77357427158,
      "time": 289,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157880461"
    },
    {
      "job": 77357427163,
      "time": 253,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7157854275"
    },
    {
      "job": 77357427180,
      "time": 244,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157857563"
    },
    {
      "job": 77356811642,
      "time": 239,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157791447"
    },
    {
      "job": 77357427140,
      "time": 103,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157823462"
    },
    {
      "job": 77357427151,
      "time": 274,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7157875457"
    },
    {
      "job": 77357427154,
      "time": 289,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7157879928"
    },
    {
      "job": 77357427157,
      "time": 226,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157860313"
    }
  ],
  "_buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/evelinag/clusternomics",
  "_commit": {
    "id": "ebccead47a895d513a8e4641acb49f7638f17151",
    "author": "Evelina Gabasova <evelina@evelinag.com>",
    "committer": "Evelina Gabasova <evelina@evelinag.com>",
    "message": "Shortened test run times\n",
    "time": 1489499815
  },
  "_maintainer": {
    "name": "Evelina Gabasova",
    "email": "egabasova@gmail.com",
    "login": "evelinag",
    "orcid": "0000-0002-3707-0657",
    "description": "",
    "uuid": 5541162
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "plyr",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "mclust",
      "role": "Suggests"
    },
    {
      "package": "gplots",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "role": "Suggests"
    }
  ],
  "_owner": "evelinag",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 16,
  "_contributors": [
    {
      "user": "evelinag",
      "count": 30,
      "uuid": 5541162
    }
  ],
  "_userbio": {
    "uuid": 5541162,
    "type": "user",
    "name": "Evelina Gabasova"
  },
  "_downloads": {
    "count": 638,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/clusternomics"
  },
  "_mentions": 1,
  "_devurl": "https://github.com/evelinag/clusternomics",
  "_searchresults": 13,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/clusternomics.html",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/evelinag/clusternomics",
  "_realowner": "evelinag",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2016-08-01"
    },
    {
      "version": "0.1.1",
      "date": "2017-03-14"
    }
  ],
  "_exports": [
    "clusterSizes",
    "coclusteringMatrix",
    "contextCluster",
    "empiricalBayesPrior",
    "generatePrior",
    "generateTestData_1D",
    "generateTestData_2D",
    "numberOfClusters"
  ],
  "_help": [
    {
      "page": "clusterSizes",
      "title": "Estimate sizes of clusters from global cluster assignments.",
      "topics": [
        "clusterSizes"
      ]
    },
    {
      "page": "coclusteringMatrix",
      "title": "Compute the posterior co-clustering matrix from global cluster assignments.",
      "topics": [
        "coclusteringMatrix"
      ]
    },
    {
      "page": "contextCluster",
      "title": "Clusternomics: Context-dependent clustering",
      "topics": [
        "contextCluster"
      ]
    },
    {
      "page": "empiricalBayesPrior",
      "title": "Fit an empirical Bayes prior to the data",
      "topics": [
        "empiricalBayesPrior"
      ]
    },
    {
      "page": "generatePrior",
      "title": "Generate a basic prior distribution for the datasets.",
      "topics": [
        "generatePrior"
      ]
    },
    {
      "page": "generateTestData_1D",
      "title": "Generate simulated 1D dataset for testing",
      "topics": [
        "generateTestData_1D"
      ]
    },
    {
      "page": "generateTestData_2D",
      "title": "Generate simulated 2D dataset for testing",
      "topics": [
        "generateTestData_2D"
      ]
    },
    {
      "page": "numberOfClusters",
      "title": "Estimate number of clusters from global cluster assignments.",
      "topics": [
        "numberOfClusters"
      ]
    }
  ],
  "_readme": "https://github.com/evelinag/clusternomics/raw/HEAD/README.md",
  "_rundeps": [
    "magrittr",
    "MASS",
    "plyr",
    "Rcpp"
  ],
  "_vignettes": [
    {
      "source": "using-clusternomics.Rmd",
      "filename": "using-clusternomics.html",
      "title": "Context-dependent clustering with Clusternomics",
      "author": "Evelina Gabasova",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Simulated data",
        "Algorithm setup",
        "Analysing clustering results",
        "Choosing number of clusters",
        "Posterior number of clusters",
        "Sizes of clusters",
        "Obtaining global clusters",
        "Co-clustering matrix",
        "Adjusted Rand index"
      ],
      "created": "2016-07-25 10:26:15",
      "modified": "2017-03-13 23:01:02",
      "commits": 3
    }
  ],
  "_score": 5.017033339298781,
  "_indexed": true,
  "_nocasepkg": "clusternomics",
  "_universes": [
    "evelinag"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-22T09:59:12.000Z",
      "distro": "noble",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "6559472870df84a02f0559c9dd1291af784306ca197d84048a048acbdbe32ec0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-22T09:59:07.000Z",
      "distro": "noble",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "9ca8755cff2bffe019187110035cafc2871e6c4941bd4e7d00254ea378dcae0d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-22T09:59:13.000Z",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "fd2f2ec08e2c23700a03a588d29a5f27d88b769a1e802567b45ca790317276d8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-22T09:59:20.000Z",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "af7d668144320e494bcd63157cfce65769a6f40bc163966349f86c51c53e8a83",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-05-22T09:59:02.000Z",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "8821c0ca15dfd413802fd3cc62be2ea5d047e34d69ba2417d5851d4270736d3e",
      "status": "success",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-22T09:58:29.000Z",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "2e3b9bf05f8f35f91243a0edac36690cfa34aefe6a66413843b6f3872643e4ae",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-22T09:58:31.000Z",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "b463a81e63334b6e2549a4a42c7101838936b72eb8422d5da94ed656fface464",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-22T09:58:10.000Z",
      "commit": "ebccead47a895d513a8e4641acb49f7638f17151",
      "fileid": "6523f59be329b35d947c665d7ab499b3d38fda2c5bd136c571bcc6468660443f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/evelinag/actions/runs/26280969603"
    }
  ]
}